Readabhgenotypes
WebDescription Plot the parental allele frequencies along the chromosomes. Usage plotAlleleFreq(genos = "genotypes") Arguments genos The output of readABHgenotypes Value A plot of parental allele frequencies along the chromosomes. output is assigned a name a ggplot2 object is returned for further manipulation. Examples WebreadABHgenotypes: Read in the output of the genosToABH plugin. reportGenos: Report the total and relative number of each allele in a... writeABHgenotypes: Export a genotype list to a .csv file. Browse all...
Readabhgenotypes
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WebOutput of readABHgenotypes. genos_2: Output of readABHgenotypes. Note that both genos object need to have identical numbers of marker x individuals. markerToPlot: A character vector of marker names which appear in the plot. Defaults to all. individualsToPlot: A character vector of individual names which appear in the plot. Defaults to all ... WebreadABHgenotypes (pathToABH, nameA = "A", nameB = "B", readPos = TRUE) Arguments Details The input files should be a .csv file holding genotypes as specified by the qtl …
Web#' Export a genotype list to a .csv file. #' #' @param genos The output of readABHgenotypes or one of the impuation/error #' correction functions. #' @param outfile The path and filename of the output file. #' #' @return A file which can be used in R/qtl or elsewhere. #' #' @examples \dontrun {writeABHgenotypes (genotypes, outfile = … WebMay 2, 2024 · plotGenos: Plot graphical genotypes. plotMarkerDensity: Plot the marker density along the chromosomes. readABHgenotypes: Read in the output of the genosToABH plugin. reportGenos: Report the total and relative number of each allele in a... writeABHgenotypes: Export a genotype list to a .csv file. Browse all... Home / CRAN / …
WebThe ABHgenotypeR package contains the following man pages: ABHgenotypeR correctStretches correctUndercalledHets imputeByFlanks plotAlleleFreq plotCompareGenos plotGenos plotMarkerDensity readABHgenotypes reportGenos writeABHgenotypes WebThe ABHgenotypeR R package to easily visualize and manipulate ABH genotypes. Introduction The ABHgenotypeR package provides simple imputation, error-correction and …
WebreadABHgenotypes: Read in the output of the genosToABH plugin. reportGenos: Report the total and relative number of each allele in a... writeABHgenotypes: Export a genotype list to a .csv file. Browse all...
http://www.idata8.com/rpackage/ABHgenotypeR/00Index.html signed you know whoWebreadABHgenotypes: Man page Source code: reportGenos: Man page Source code: writeABHgenotypes: Man page Source code: ABHgenotypeR documentation built on May 2, 2024, 6:33 a.m. R Package Documentation. rdrr.io home R language documentation Run R code online. Browse R Packages. signed young bucks bookWebA brown eyed person has either one allele for brown eyes or two. They can carry the blue eye but it is not expressed. Other alleles are more complex. Some are co-dominate. The best … signed your mindWebreadABHgenotypes: Read in the output of the genosToABH plugin. reportGenos: Report the total and relative number of each allele in a... writeABHgenotypes: Export a genotype list to a .csv file. Browse all... signee crossword clueWebThe Rh system is actually far more complex than the ABO system in that there are 35 different possibilities that one could inherit from each parent. These, however, are roughly … signee hoffmanWebFeb 4, 2016 · The ABHgenotypeR package is supposed to serve as an intermediate but independent analysis tool between the TASSEL GBS pipeline and the qtl package. … signee crosswordWebMay 2, 2024 · ABHgenotypeR: Easy Visualization of ABH Genotypes Easy to use functions to visualize marker data from biparental populations. Useful for both analyzing and … signee hoffman bakersfield chiropractor